general.c

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/* $Id$Revision: */
/* vim:set shiftwidth=4 ts=8: */

/*************************************************************************
 * Copyright (c) 2011 AT&T Intellectual Property 
 * All rights reserved. This program and the accompanying materials
 * are made available under the terms of the Eclipse Public License v1.0
 * which accompanies this distribution, and is available at
 * http://www.eclipse.org/legal/epl-v10.html
 *
 * Contributors: See CVS logs. Details at http://www.graphviz.org/
 *************************************************************************/

#include "general.h"
#include <errno.h>

#ifdef DEBUG
double _statistics[10];
#endif

real vector_median(int n, real *x){
  /* find the median value in a list of real */
  int *p = NULL;
  real res;
  vector_ordering(n, x, &p, TRUE);

  if ((n/2)*2 == n){
    res = 0.5*(x[p[n/2-1]] + x[p[n/2]]);
  } else {
    res = x[p[n/2]];
  }
  FREE(p);
  return res;
}
real vector_percentile(int n, real *x, real y){
  /* find the value such that y% of element of vector x is <= that value.
   y: a value between 0 and 1.
  */
  int *p = NULL, i;
  real res;
  vector_ordering(n, x, &p, TRUE);
  

  y = MIN(y, 1);
  y = MAX(0, y);

  i = n*y;
  res = x[p[i]];
  FREE(p); return res;
}

real drand(){
  return rand()/(real) RAND_MAX;
}

int irand(int n){
  /* 0, 1, ..., n-1 */
  assert(n > 1);
  /*return (int) MIN(floor(drand()*n),n-1);*/
  return rand()%n;
}

int *random_permutation(int n){
  int *p;
  int i, j, pp, len;
  if (n <= 0) return NULL;
  p = MALLOC(sizeof(int)*n);
  for (i = 0; i < n; i++) p[i] = i;

  len = n;
  while (len > 1){
    j = irand(len);
    pp = p[len-1];
    p[len-1] = p[j];
    p[j] = pp;
    len--;
  }
  return p;
}


real* vector_subtract_from(int n, real *x, real *y){
  /* y = x-y */
  int i;
  for (i = 0; i < n; i++) y[i] = y[i] - x[i];
  return y;
}
real* vector_subtract_to(int n, real *x, real *y){
  /* y = x-y */
  int i;
  for (i = 0; i < n; i++) y[i] = x[i] - y[i];
  return y;
}
real* vector_add_to(int n, real *x, real *y){
  /* y = x-y */
  int i;
  for (i = 0; i < n; i++) y[i] = x[i] + y[i];
  return y;
}

real vector_product(int n, real *x, real *y){
  real res = 0;
  int i;
  for (i = 0; i < n; i++) res += x[i]*y[i];
  return res;
}

real* vector_saxpy(int n, real *x, real *y, real beta){
  /* y = x+beta*y */
  int i;
  for (i = 0; i < n; i++) y[i] = x[i] + beta*y[i];
  return y;
}

real* vector_saxpy2(int n, real *x, real *y, real beta){
  /* x = x+beta*y */
  int i;
  for (i = 0; i < n; i++) x[i] = x[i] + beta*y[i];
  return x;
}

void vector_print(char *s, int n, real *x){
  int i;
    printf("%s{",s); 
    for (i = 0; i < n; i++) {
      if (i > 0) printf(",");
      printf("%f",x[i]); 
    }
    printf("}\n");
}

void vector_take(int n, real *v, int m, int *p, real **u){
  /* take m elements v[p[i]]],i=1,...,m and oput in u */
  int i;

  if (!*u) *u = MALLOC(sizeof(real)*m);

  for (i = 0; i < m; i++) {
    assert(p[i] < n && p[i] >= 0);
    (*u)[i] = v[p[i]];
  }
  
}

void vector_float_take(int n, float *v, int m, int *p, float **u){
  /* take m elements v[p[i]]],i=1,...,m and oput in u */
  int i;

  if (!*u) *u = MALLOC(sizeof(float)*m);

  for (i = 0; i < m; i++) {
    assert(p[i] < n && p[i] >= 0);
    (*u)[i] = v[p[i]];
  }
  
}

int comp_ascend(const void *s1, const void *s2){
  real *ss1, *ss2;
  ss1 = (real*) s1;
  ss2 = (real*) s2;

  if ((ss1)[0] > (ss2)[0]){
    return 1;
  } else if ((ss1)[0] < (ss2)[0]){
    return -1;
  }
  return 0;
}

int comp_descend(const void *s1, const void *s2){
  real *ss1, *ss2;
  ss1 = (real*) s1;
  ss2 = (real*) s2;

  if ((ss1)[0] > (ss2)[0]){
    return -1;
  } else if ((ss1)[0] < (ss2)[0]){
    return 1;
  }
  return 0;
}
int comp_descend_int(const void *s1, const void *s2){
  int *ss1, *ss2;
  ss1 = (int*) s1;
  ss2 = (int*) s2;

  if ((ss1)[0] > (ss2)[0]){
    return -1;
  } else if ((ss1)[0] < (ss2)[0]){
    return 1;
  }
  return 0;
}

int comp_ascend_int(const void *s1, const void *s2){
  int *ss1, *ss2;
  ss1 = (int*) s1;
  ss2 = (int*) s2;

  if ((ss1)[0] > (ss2)[0]){
    return 1;
  } else if ((ss1)[0] < (ss2)[0]){
    return -1;
  }
  return 0;
}


void vector_ordering(int n, real *v, int **p, int ascending){
  /* give the position of the lagest, second largest etc in vector v if ascending = FALSE

     or

     give the position of the smallest, second smallest etc  in vector v if ascending = TRUE.
     results in p. If *p == NULL, p is assigned.

     ascending: TRUE if v[p] is from small to large.
  */

  real *u;
  int i;

  if (!*p) *p = MALLOC(sizeof(int)*n);
  u = MALLOC(sizeof(real)*2*n);

  for (i = 0; i < n; i++) {
    u[2*i+1] = i;
    u[2*i] = v[i];
  }

  if (ascending){
    qsort(u, n, sizeof(real)*2, comp_ascend);
  } else {
    qsort(u, n, sizeof(real)*2, comp_descend);
  }

  for (i = 0; i < n; i++) (*p)[i] = (int) u[2*i+1];
  FREE(u);

}

void vector_sort_real(int n, real *v, int ascending){
  if (ascending){
    qsort(v, n, sizeof(real), comp_ascend);
  } else {
    qsort(v, n, sizeof(real), comp_descend);
  }
}
void vector_sort_int(int n, int *v, int ascending){
  if (ascending){
    qsort(v, n, sizeof(int), comp_ascend_int);
  } else {
    qsort(v, n, sizeof(int), comp_descend_int);
  }
}

int excute_system_command3(char *s1, char *s2, char *s3){
  char c[1000];

  strcpy(c, s1);
  strcat(c, s2);
  strcat(c, s3);
  return system(c);
}

int excute_system_command(char *s1, char *s2){
  char c[1000];

  strcpy(c, s1);
  strcat(c, s2);
  return system(c);
}

real distance_cropped(real *x, int dim, int i, int j){
  int k;
  real dist = 0.;
  for (k = 0; k < dim; k++) dist += (x[i*dim+k] - x[j*dim + k])*(x[i*dim+k] - x[j*dim + k]);
  dist = sqrt(dist);
  return MAX(dist, MINDIST);
}

real distance(real *x, int dim, int i, int j){
  int k;
  real dist = 0.;
  for (k = 0; k < dim; k++) dist += (x[i*dim+k] - x[j*dim + k])*(x[i*dim+k] - x[j*dim + k]);
  dist = sqrt(dist);
  return dist;
}

real point_distance(real *p1, real *p2, int dim){
  int i;
  real dist;
  dist = 0;
  for (i = 0; i < dim; i++) dist += (p1[i] - p2[i])*(p1[i] - p2[i]);
  return sqrt(dist);
}

char *strip_dir(char *s){
  int i, first = TRUE;
  if (!s) return s;
  for (i = strlen(s); i >= 0; i--) {
    if (first && s[i] == '.') {/* get rid of .mtx */
      s[i] = '\0';
      first = FALSE;
    }
    if (s[i] == '/') return (char*) &(s[i+1]);
  }
  return s;
}

void scale_to_box(real xmin, real ymin, real xmax, real ymax, int n, int dim, real *x){
  real min[3], max[3], min0[3], ratio = 1;
  int i, k;

  for (i = 0; i < dim; i++) {
    min[i] = x[i];
    max[i] = x[i];
  }

  for (i = 0; i < n; i++){
    for (k = 0; k < dim; k++) {
      min[k] = MIN(x[i*dim+k], min[k]);
      max[k] = MAX(x[i*dim+k], max[k]);
    }
  }

  if (max[0] - min[0] != 0) {
    ratio = (xmax-xmin)/(max[0] - min[0]);
  }
  if (max[1] - min[1] != 0) {
    ratio = MIN(ratio, (ymax-ymin)/(max[1] - min[1]));
  }
  
  min0[0] = xmin;
  min0[1] = ymin;
  min0[2] = 0;
  for (i = 0; i < n; i++){
    for (k = 0; k < dim; k++) {
      x[i*dim+k] = min0[k] + (x[i*dim+k] - min[k])*ratio;
    }
  }
  
  
}

int digitsQ(char *s){
  while (*s && *s - '0' >= 0 && *s - '0' <= 9) {
    s++;
  }
  if (*s) return 0;
  return 1;
}
int validQ_int_string(char *to_convert, int *v){
  /* check to see if this is a string is integer */
  char *p = to_convert;
  uint64_t val;
  errno = 0;
  val = strtoul(to_convert, &p, 10);
  if (errno != 0 ||// conversion failed (EINVAL, ERANGE)
      to_convert == p || // conversion failed (no characters consumed)
      *p != 0
      ) return 0;
  if (val > INT_MAX || val < INT_MIN) return 0;
  *v = (int) val;
  return 1;
}