#include "general.h"
#include "DotIO.h"
#include "clustering.h"
#include "mq.h"
#include "color_palette.h"
#include "colorutil.h"

Include dependency graph for DotIO.c:

Data Structures
struct	Agnodeinfo_t

Macros
#define	STANDALONE

#define	ND_id(n) (((Agnodeinfo_t*)((n)->base.data))->id)

Functions
void	attach_edge_colors (Agraph_t g, int dim, real colors)

Agraph_t *	SparseMatrix_read_dot (FILE *f)

SparseMatrix	SparseMatrix_import_dot (Agraph_t g, int dim, real label_sizes, real x, int n_edge_label_nodes, int *edge_label_nodes, int format, SparseMatrix D)

int	Import_dot_splines (Agraph_t g, int ne, char ***xsplines)

void	edgelist_export (FILE f, SparseMatrix A, int dim, real x)

void	dump_coordinates (char name, int n, int dim, real x)

Agraph_t *	makeDotGraph (SparseMatrix A, char name, int dim, real x, int with_color, int with_label, int use_matrix_value)

char *	cat_string (char s1, char s2)

char *	cat_string3 (char s1, char s2, char *s3, int id)

Agraph_t *	convert_edge_labels_to_nodes (Agraph_t *g)

Agraph_t *	assign_random_edge_color (Agraph_t *g)

void	Dot_SetClusterColor (Agraph_t g, float rgb_r, float rgb_g, float rgb_b, int *clusters)

SparseMatrix	Import_coord_clusters_from_dot (Agraph_t g, int maxcluster, int dim, int nn, real label_sizes, real x, int clusters, float rgb_r, float rgb_g, float rgb_b, float fsz, char *labels, int default_color_scheme, int clustering_scheme, int useClusters)

void	attached_clustering (Agraph_t *g, int maxcluster, int clustering_scheme)

void	initDotIO (Agraph_t *g)

void	setDotNodeID (Agnode_t *n, int v)

int	getDotNodeID (Agnode_t *n)

Macro Definition Documentation

#define ND_id ( n ) (((Agnodeinfo_t*)((n)->base.data))->id)

Definition at line 28 of file DotIO.c.

Referenced by attach_edge_colors(), attached_clustering(), convert_edge_labels_to_nodes(), Dot_SetClusterColor(), getDotNodeID(), Import_coord_clusters_from_dot(), Import_dot_splines(), makeDotGraph(), setDotNodeID(), and SparseMatrix_import_dot().

#define STANDALONE

Definition at line 14 of file DotIO.c.

Function Documentation

Agraph_t* assign_random_edge_color ( Agraph_t * g )

Definition at line 752 of file DotIO.c.

References agattr(), AGEDGE, agfstedge(), agfstnode(), agnxtedge(), agnxtnode(), agxset(), drand(), and hue2rgb().

void attach_edge_colors	(	Agraph_t *	g,
		int	dim,
		real *	colors
	)

Definition at line 91 of file DotIO.c.

References agattr(), AGEDGE, agfstnode(), agfstout(), aghead(), agnxtnode(), agnxtout(), agxset(), and ND_id.

void attached_clustering	(	Agraph_t *	g,
		int	maxcluster,
		int	clustering_scheme
	)

Definition at line 1088 of file DotIO.c.

References agattr(), AGEDGE, agfstnode(), agfstout(), aghead(), agnedges(), agnnodes(), AGNODE, agnxtnode(), agnxtout(), agxget(), agxset(), assert, CLUSTERING_MODULARITY, CLUSTERING_MQ, FALSE, FREE, MALLOC, MATRIX_TYPE_REAL, modularity_clustering(), mq_clustering(), N_NEW, ND_id, NULL, real, SparseMatrix_delete(), SparseMatrix_from_coordinate_arrays(), TRUE, and Verbose.

char* cat_string	(	char *	s1,
		char *	s2
	)

Definition at line 653 of file DotIO.c.

char* cat_string3	(	char *	s1,
		char *	s2,
		char *	s3,
		int	id
	)

Definition at line 662 of file DotIO.c.

Referenced by convert_edge_labels_to_nodes().

Agraph_t* convert_edge_labels_to_nodes ( Agraph_t * g )

Definition at line 678 of file DotIO.c.

References agattr(), AGEDGE, agedge(), agfstedge(), agfstnode(), aghead(), agnameof(), agnedges(), agnnodes(), AGNODE, agnxtedge(), agnxtnode(), agopen(), agset(), agtail(), agxget(), cat_string3(), Agraph_s::desc, ND_id, and NULL.

void Dot_SetClusterColor	(	Agraph_t *	g,
		float *	rgb_r,
		float *	rgb_g,
		float *	rgb_b,
		int *	clusters
	)

Definition at line 781 of file DotIO.c.

References agattr(), agfstnode(), AGNODE, agnxtnode(), agxset(), ND_id, NULL, and rgb2hex().

void dump_coordinates	(	char *	name,
		int	n,
		int	dim,
		real *	x
	)

Definition at line 432 of file DotIO.c.

References strip_dir().

void edgelist_export	(	FILE *	f,
		SparseMatrix	A,
		int	dim,
		real *	x
	)

Definition at line 387 of file DotIO.c.

References dist(), SparseMatrix_struct::ia, SparseMatrix_struct::ja, SparseMatrix_struct::m, MAX, MIN, SparseMatrix_struct::n, SparseMatrix_struct::nz, and real.

int getDotNodeID ( Agnode_t * n )

Definition at line 1192 of file DotIO.c.

References ND_id.

SparseMatrix Import_coord_clusters_from_dot	(	Agraph_t *	g,
		int	maxcluster,
		int	dim,
		int *	nn,
		real **	label_sizes,
		real **	x,
		int **	clusters,
		float **	rgb_r,
		float **	rgb_g,
		float **	rgb_b,
		float **	fsz,
		char ***	labels,
		int	default_color_scheme,
		int	clustering_scheme,
		int	useClusters
	)

Definition at line 799 of file DotIO.c.

References agattr(), AGEDGE, agfstnode(), agfstout(), agfstsubg(), agget(), aghead(), agnameof(), agnedges(), agnnodes(), AGNODE, agnxtnode(), agnxtout(), agnxtsubg(), agxget(), agxset(), assert, CLUSTERING_MODULARITY, CLUSTERING_MQ, COLOR_OK, COLOR_SCHEME_ADAM, COLOR_SCHEME_ADAM_BLEND, COLOR_SCHEME_BLUE_YELLOW, COLOR_SCHEME_GREY, COLOR_SCHEME_GREY_RED, COLOR_SCHEME_NONE, COLOR_SCHEME_PASTEL, COLOR_SCHEME_PRIMARY, COLOR_SCHEME_SEQUENTIAL_SINGLEHUE_RED, COLOR_SCHEME_SEQUENTIAL_SINGLEHUE_RED_LIGHTER, COLOR_SCHEME_WHITE_RED, colorxlate(), FALSE, FREE, MALLOC, MATRIX_TYPE_REAL, MAX, MAX_COLOR, MIN, modularity_clustering(), mq_clustering(), N_NEW, ND_id, NULL, palette_adam, palette_adam_blend, palette_blue_to_yellow, palette_grey, palette_grey_to_red, palette_pastel, palette_primary, palette_sequential_singlehue_red, palette_sequential_singlehue_red_lighter, palette_white_to_red, POINTS, real, color_s::RGBA, RGBA_DOUBLE, SparseMatrix_from_coordinate_arrays(), TRUE, color_s::u, and Verbose.

int Import_dot_splines	(	Agraph_t *	g,
		int *	ne,
		char ***	xsplines
	)

Definition at line 342 of file DotIO.c.

References agattr(), AGEDGE, agfstnode(), agfstout(), agnedges(), agnxtnode(), agnxtout(), agxget(), ND_id, and NULL.

void initDotIO ( Agraph_t * g )

Definition at line 1182 of file DotIO.c.

References aginit(), AGNODE, and TRUE.

Agraph_t* makeDotGraph	(	SparseMatrix	A,
		char *	name,
		int	dim,
		real *	x,
		int	with_color,
		int	with_label,
		int	use_matrix_value
	)

Definition at line 466 of file DotIO.c.

References SparseMatrix_struct::a, ABS, agattr(), Agdirected, AGEDGE, agedge(), agfstnode(), AGNODE, agnxtnode(), agopen(), AGRAPH, Agundirected, agxset(), distance(), FALSE, FREE, hue2rgb(), SparseMatrix_struct::ia, SparseMatrix_struct::ja, SparseMatrix_struct::m, MALLOC, MATRIX_TYPE_COMPLEX, MATRIX_TYPE_INTEGER, MATRIX_TYPE_REAL, MAX, MIN, N_NEW, ND_id, NULL, SparseMatrix_struct::nz, real, SparseMatrix_known_undirected, strip_dir(), TRUE, and SparseMatrix_struct::type.

void setDotNodeID	(	Agnode_t *	n,
		int	v
	)

Definition at line 1187 of file DotIO.c.

References ND_id.

SparseMatrix SparseMatrix_import_dot	(	Agraph_t *	g,
		int	dim,
		real **	label_sizes,
		real **	x,
		int *	n_edge_label_nodes,
		int **	edge_label_nodes,
		int	format,
		SparseMatrix *	D
	)

Definition at line 135 of file DotIO.c.

References SparseMatrix_struct::a, agattr(), AGEDGE, agerr(), AGERR, agfstnode(), agfstout(), agget(), aghead(), agnameof(), agnedges(), agnnodes(), AGNODE, agnxtnode(), agnxtout(), agxget(), assert, FALSE, FORMAT_COORD, FORMAT_CSR, FREE, SparseMatrix_struct::ia, SparseMatrix_struct::ja, MALLOC, MATRIX_TYPE_REAL, N_NEW, ND_id, NULL, SparseMatrix_struct::nz, POINTS, real, SparseMatrix_from_coordinate_arrays(), SparseMatrix_new(), and TRUE.

Agraph_t* SparseMatrix_read_dot ( FILE * f )

Definition at line 122 of file DotIO.c.

References aginit(), AGNODE, agread(), and TRUE.

Data Structures

Macros

Functions

Macro Definition Documentation

Function Documentation